Protocols
1. Isolating human gastrointestinal epithelium from surgical resections or biopsy specimens:
(a) high quality crypt purification
(b) quick and dirty method - no EDTA and non-enzymatic
(c) colorectal cancer colonoids
2. Passaging human epithelium-only intestinal organoids (a.k.a. enteroids/colonoids)
3. Generating LWRN-conditioned media (CM)
4. Assessing LWRN CM Wnt activity
One-Glo luciferase reporter (Promega)
TOPflash luciferase assay (Biotium)
5. Complete gastrointestinal growth media (HCM…)*
6. Freeze-thawing tissue biopsies and enteroid/colonoid cultures
7. Shipping and receiving live enteroid/colonoid cultures
8. Transwell human colonoid/enteroid monolayers
96 well transwell plate monolayers
9. IHC/IF of enteroids/colonoids and 2D transwell monolayers
10. Single cell human colonoid-forming efficiency assay
Method A: Human Colonoid-Forming Efficiency Assay (CFA) - new protocol
Method B: Single cell human colonoid-forming efficiency assay - old protocol
11. Human colonoid snap-freeze prep for western-DNA-RNA
12. Preparation of human colonoids for orthotopic transplant into mice.